solve.cpp File Reference

#include <../../nrnconf.h>
#include "membdef.h"
#include "membfunc.h"
#include "nrniv_mf.h"
#include "nrnmpiuse.h"
#include "ocnotify.h"
#include "section.h"
#include "spmatrix.h"
#include "treeset.h"
#include <stdio.h>
#include <stdlib.h>
#include <math.h>
#include <utility>

Go to the source code of this file.

Functions
static void	node_free ()
static void	triang (NrnThread *)
static void	bksub (NrnThread *)
double	node_dist (Section *sec, Node *node)
double	topol_distance (Section *sec1, Node *node1, Section *sec2, Node *node2, Section **prootsec, Node **prootnode)
void	distance (void)
static void	dashes (Section *sec, int offset, int first)
void	nrnhoc_topology (void)
void	nrn_solve (NrnThread *_nt)
void	nrn_clear_mark (void)
short	nrn_increment_mark (Section *sec)
short	nrn_value_mark (Section *sec)
Section *	sec_alloc ()
	Allocate a new Section object. More...
static void	node_free (Section *sec)
static void	section_unlink (Section *sec)
void	sec_free (hoc_Item *secitem)
void	section_unref (Section *sec)
void	section_ref (Section *sec)
void	nrn_sec_ref (Section **psec, Section *sec)
void	node_destruct (Node **pnode, int n)
static Node *	node_clone (Node *nd1)
static void	node_realloc (Section *sec, short nseg)
void	node_alloc (Section *sec, short nseg)
void	section_order (void)

Variables
void(*	nrn_multisplit_solve_ )()
void(*	nrnpy_o2loc_p_ )(Object *, Section **, double *)
void(*	nrnpy_o2loc2_p_ )(Object *, Section **, double *)
int	section_count
Section **	secorder
static Section *	origin_sec
int	keep_nseg_parm_

Function Documentation

bksub()

void bksub

(

NrnThread *

_nt

)

Definition at line 410 of file solve.cpp.

dashes()

static void dashes ( Section *  sec, int  offset, int  first  )

static

Definition at line 299 of file solve.cpp.

distance()

void distance

(

void

)

Definition at line 226 of file solve.cpp.

node_alloc()

void node_alloc	(	Section *	sec,
		short	nseg
	)

Definition at line 705 of file solve.cpp.

node_clone()

static Node* node_clone ( Node *  nd1 )

static

Definition at line 582 of file solve.cpp.

node_destruct()

void node_destruct	(	Node **	pnode,
		int	n
	)

Definition at line 569 of file solve.cpp.

node_dist()

double node_dist	(	Section *	sec,
		Node *	node
	)

Definition at line 153 of file solve.cpp.

node_free() [1/2]

static void node_free ( )

static

node_free() [2/2]

static void node_free ( Section *  sec )

static

Definition at line 450 of file solve.cpp.

node_realloc()

static void node_realloc ( Section *  sec, short  nseg  )

static

Definition at line 628 of file solve.cpp.

nrn_clear_mark()

void nrn_clear_mark

(

void

)

Definition at line 426 of file solve.cpp.

nrn_increment_mark()

short nrn_increment_mark

(

Section *

sec

)

Definition at line 431 of file solve.cpp.

nrn_sec_ref()

void nrn_sec_ref	(	Section **	psec,
		Section *	sec
	)

Definition at line 525 of file solve.cpp.

nrn_solve()

void nrn_solve

(

NrnThread *

_nt

)

Definition at line 333 of file solve.cpp.

nrn_value_mark()

short nrn_value_mark

(

Section *

sec

)

Definition at line 434 of file solve.cpp.

nrnhoc_topology()

void nrnhoc_topology

(

void

)

Definition at line 285 of file solve.cpp.

sec_alloc()

Section* sec_alloc

(

)

Allocate a new Section object.

Changed from emalloc to allocation from a SectionPool in order to allow safe checking of whether a void* is a possible Section* without the possibility of invalid memory read errors. Note that freeing sections must be done with nrn_section_free(Section*).

Definition at line 445 of file solve.cpp.

sec_free()

void sec_free

(

hoc_Item *

secitem

)

Definition at line 467 of file solve.cpp.

section_order()

void section_order

(

void

)

Definition at line 729 of file solve.cpp.

section_ref()

void section_ref

(

Section *

sec

)

Definition at line 520 of file solve.cpp.

section_unlink()

static void section_unlink ( Section *  sec )

static

Definition at line 536 of file solve.cpp.

section_unref()

void section_unref

(

Section *

sec

)

Definition at line 509 of file solve.cpp.

topol_distance()

double topol_distance	(	Section *	sec1,
		Node *	node1,
		Section *	sec2,
		Node *	node2,
		Section **	prootsec,
		Node **	prootnode
	)

Definition at line 167 of file solve.cpp.

triang()

static void triang ( NrnThread *  _nt )

static

Definition at line 393 of file solve.cpp.

Variable Documentation

keep_nseg_parm_

int keep_nseg_parm_

extern

Definition at line 1474 of file cabcode.cpp.

nrn_multisplit_solve_

void(* nrn_multisplit_solve_) ()

(

)

Definition at line 76 of file solve.cpp.

nrnpy_o2loc2_p_

void(* nrnpy_o2loc2_p_) (Object *, Section **, double *) ( Object *  , Section **  , double *    )

extern

Definition at line 31 of file point.cpp.

nrnpy_o2loc_p_

void(* nrnpy_o2loc_p_) (Object *, Section **, double *) ( Object *  , Section **  , double *    )

extern

Definition at line 30 of file point.cpp.

origin_sec

Section* origin_sec

static

Definition at line 224 of file solve.cpp.

secorder

Section** secorder

Definition at line 82 of file solve.cpp.

section_count

int section_count

Definition at line 81 of file solve.cpp.